Updates


About the Updates category (1)
Concordance command added (10)
The annotation database (4)
Changes to filter_variants_intervals; filter intervals programmatically (2)
Fast linear regression for multiple phenotypes, eQTLs (13)
Using filter_intervals to query the 16GB gnomAD sites dataset in 300ms on your laptop (1)
[Experimental] Population Aware Relatedness Estimation (1)
Keynote video from Spark Summit East 2017 (1)
Hail at Spark Summit West 2017 in San Francisco, June 6 - 7 (1)
Deployment Changes - branching off for faster development (1)
Hail 0.1 is live! (1)
Logistic regression burden tests (1)
Linear regression burden tests, collapsing genotypes by variant key (1)
Read from and write to hdfs/gs/s3 from Python (1)
How to filter to PASS variants from VCFs (1)
Transmission disequilibrium test added (1)
[Breaking Change] filter_samples_list now takes a list (3)
Genotype dosage option in linear regression (1)
Generic genotype schemas in Hail (1)
[Breaking change] Lmmreg Changes + Kinship Matrix (1)
Hail now detects multiallelics on VCF import (1)
Hail 'type' module renamed to 'expr' (1)
Added Firth logistic regression (2)
[Breaking change] Removed Sample type, `s.id` is no longer valid syntax (1)
Introducing query_genotypes; breaking changes to query methods (2)
Removed import_annotations_table, added VariantDataset.from_keytable (1)
Python exponentiation syntax added (1)
Added ability to compute HWE on subsets of samples (1)
Fields versus methods in expression language (1)
New expression language docs! (1)