Help [0.2]


Topic Replies Created
About the Help [0.2] category 1 October 22, 2018
Spark version problem 4 April 15, 2019
Hail Py4JError while calling z:is.hail.backend.spark.SparkBackend.executeJSON 13 April 14, 2019
Py4JNetworkError importing file 19 April 9, 2019
Hail V01 to V02 missing genotypes? 3 April 18, 2019
Genotype matrix in hail 0.2 6 January 16, 2019
Adding sample labels to a relationship matrix 4 April 13, 2019
Large scale ingest 8 March 27, 2019
Vep config File does not exist 3 April 1, 2019
Cant write out vep annotated vcf file 23 January 9, 2019
IBD estimation error 4 March 25, 2019
Extract specific variants by rsID 3 March 27, 2019
VEP memoization caching 3 March 27, 2019
Hail 0.2 RVD error! Keys found out of order 7 March 21, 2019
Error building jar for Hail 0.2.11 6 March 21, 2019
Hail 0.2 help for warning message 23 March 14, 2019
Speed/streaming problems with Hail 0.2 7 March 19, 2019
Issuing Spark-SQL on Hail Tables 2 March 18, 2019
How do I install Hail for use on a single node of an HPC cluster? 3 January 14, 2019
Could not able to export the data to ElasticSearch 26 January 9, 2019
Jupyter/Windows Setup Help 2 March 12, 2019
Filter_rows using row_key of a different source 6 March 7, 2019
I get a NegativeArraySizeException when loading a PLINK file 2 March 8, 2019
Spin up AWS EMR clusters with Hail 2 December 27, 2018
Error running miniconda installed VEP 5 February 27, 2019
Filter vars on MAF and output rsIDs and freq 5 March 4, 2019
Still struggling with OutOfMemoryError: Java heap space 1 March 4, 2019
Filtering out samples using hl.is_nan 3 March 1, 2019
VEP annotation (IOException: error=13, Permission denied) 9 January 18, 2019
Question about joint analysis in Hail (hl.MatrixTable.union_cols) 3 March 1, 2019