# Hail commands failing to run in Terra workspace spark cluster **URL:** \ **Category:** Hail Query & hailctl\ **Created:** [February 21, 2025, 7:22pm UTC](https://discuss.hail.is/t/hail-commands-failing-to-run-in-terra-workspace-spark-cluster/4056 "2025-02-21T19:22:48Z")\ **Posts on this page:** 1\ **Page:** 1
**Author:** ![Oypeters](https://yyz2.discourse-cdn.com/flex036/user_avatar/discuss.hail.is/oypeters/32/1230_2.png) [@Oypeters](https://discuss.hail.is/u/Oypeters)\ **Post date:** [February 21, 2025, 7:22pm UTC](https://discuss.hail.is/t/hail-commands-failing-to-run-in-terra-workspace-spark-cluster/4056/1 "2025-02-21T19:22:48Z")
Hi, I am working in Terra workspace, and using hail for my analyses. My input files happen to be .gprobs and .sample files (oxford format) for 11 different chromosomes. I have tried to use import\_gen to convert these files to hail matrix table, but import\_gen just ran forever and was unsuccessful. I then tried creating plink format files (bim, bed, and fam), with the goal of using import\_plink to create hail matrix tables. It appears to work, but when I run hl.filter\_intervals on the hail matrix table, it gives this error: TypeError: The point type is incompatible with key type of the dataset (‘dtype(‘locus’)’, ‘dtype(‘struct{locus: locus}’)’). And when I simply ask for a count, it runs forever with no output. When I look at the jupyter log, I get this error: YarnAllocatorNodeHealthTracker: WARN: No available nodes reported, please check Resource Manager. I have increased resources up to CPU (16), Workers (120), Preemptibles (100), Memory (26), Disk size (500), but the errors continue. Please, assist me troubleshoot why hail is not working. I have looked through the hail forum, but can’t find a solution. I am wondering if it is a data size issue because I have successfully run these processing steps using hail with this cluster on smaller files (genotype arrays) and now I am having to run the process on imputation files which are much larger. Thank you. Oyomoare