Hi, I’m working first time with the genomic data. First of all congratulations and thanks to the Hail team for coming up with the solution for big data in this field. My question is, can I export merged plink data (from all three .bim/.bed/.fam files) in excel format or csv format? Yes, I have a…

Export plink data merged from .bim/.bed/.fam files into Excel or CSV format

Ahsan_Bilal November 23, 2017, 4:36pm 6

Thanks it actually worked!

but can I transpose my (merged) data directly after importing plink binary files?

Topic		Replies	Views
After importing a PLINK dataset with skip_invalid_loci=True, I have no variants Hail Query & hailctl	3	449	August 24, 2020
Export MT as PLINK2 pgen/pvar/psam Feature Requests	4	51	September 18, 2024
Import multiple plink files Help [0.1]	12	1342	October 9, 2017
Exporting matrix table with phased data to plink Hail Query & hailctl	2	645	November 19, 2018
Hl.export_plink taking too long Hail Query & hailctl	0	22	April 23, 2025