Hail Discussion

Topic	Replies	Views	Activity
Possible incorrect linreg aggregator results in 0.2.29 - 0.2.37 Updates We just fixed a bug in the linreg aggregator that has existed since release 0.2.29, and which will be fixed in 0.2.38. (It is fixed by this PR, which will merge into master shortly.) First off, any regressions containin…	3	88	April 17, 2020
Welcome to the Hail community! Updates	1	1761	August 26, 2016
Locus erring about the wrong reference genome Help [0.2]	15	246	June 2, 2020
Convert Table field type Help [0.2]	10	15	June 2, 2020
Using hail with windows subsystems for linux Help [0.2]	3	21	May 29, 2020
Issue running Spark locally: java.net.BindException Help [0.2]	3	12	June 1, 2020
Gwas analyis on whole exome data without controls Science	13	55	May 30, 2020
Generating index files vs. using pre-generated index for BGEN Help [0.2]	8	23	May 29, 2020
BlockMatrix.transpose Correctness Bug Updates	2	13	May 28, 2020
Error summary: VCFParseError: unexpected end of line Help [0.2]	5	26	May 19, 2020
ArrayIndexOutOfBoundsException error in hail 0.2.40 Help [0.2]	19	58	May 18, 2020
Hail cluster creation error Help [0.2]	19	255	May 14, 2020
Issues with sample and variant QC by group Help [0.2]	10	175	May 14, 2020
Conditional annotate_entries Help [0.2]	9	55	May 14, 2020
Pip install hail not working Help [0.2]	2	24	May 13, 2020
Export_vcf with VEP Help [0.2]	3	42	May 12, 2020
Compound hets and array<str> to list help Help [0.2]	3	32	May 12, 2020
How to run GWAS from UK Biobank efficiently on Hail Help [0.2]	11	143	May 11, 2020
How to create a cluster with 8 cpus and 0 preemptible Help [0.2]	7	38	May 10, 2020
VCFParseError on write MatrixTable Help [0.2]	4	123	May 9, 2020
Import_vcf from an ugly file, FORMAT issues Help [0.2]	15	57	May 9, 2020
Multiple group statistics Help [0.2]	7	40	May 8, 2020
Setting number of preemptible workers in `hailctl dataproc start` Help [0.2]	12	153	May 7, 2020
Joint genotype example vcf file Help [0.2]	11	320	May 6, 2020
How access Neale Lab genetic correlation browser? Help [0.2]	3	41	May 6, 2020
Yarn memory overhead Help [0.2]	4	50	May 4, 2020
From_pandas triggering python different versions error Help [0.2]	21	55	May 1, 2020
Hail JAR not the right version of Spark Help [0.2]	3	45	April 30, 2020
Gene-based GWAS Help [0.2]	3	69	April 29, 2020
FYI: VEP annotation inconsistencies gnomad.utils Science	1	38	April 28, 2020

Possible incorrect linreg aggregator results in 0.2.29 - 0.2.37

We just fixed a bug in the linreg aggregator that has existed since release 0.2.29, and which will be fixed in 0.2.38. (It is fixed by this PR, which will merge into master shortly.) First off, any regressions containin…