Hail Query & hailctl

Topic	Replies	Views	Activity
I cannot access the VEP, Annotation DB, or Datasets API buckets Due to changes in the price of transferring data from a Google Cloud Storage multi-regional bucket to a regional bucket, we had to move our VEP reference data, Annotation DB datasets, and Datasets API datasets, into regi…	1	172	February 28, 2024
About the Hail Query & hailctl category	0	805	October 22, 2018
Are 0/0 genotypes counted as defined in hl.is_defined(mt.GT)? And are NA genotypes counted as missing in hl.is_missing(mt.GT)?	1	25	April 26, 2024
UK Biobank RAP - Generating Summary File from Variant QC	3	54	April 26, 2024
Most efficient way to filter and densify VDS	0	18	April 24, 2024
IllegalArgumentException	0	18	April 24, 2024
Aggregating a numeric array	2	151	April 11, 2024
Distributing import_vcf and multi_way_union_mts across Spark workers	0	38	April 11, 2024
Outputting sample IDs for multi allelic sites	5	94	April 10, 2024
Error in load_dataset()	3	39	April 10, 2024
Trinucleotide Count	0	53	April 1, 2024
Hail Tutorial Error	0	57	March 31, 2024
Unable to connect to Jupyter notebook	2	115	March 27, 2024
Is there a more computationally efficient way to get a single variant from VDS?	3	92	March 27, 2024
REF ALT miss-matching after split multi-allelic lines	4	86	March 27, 2024
Understanding how hwe_normalized_pca works	2	104	March 26, 2024
NA causes export errors out	4	84	March 26, 2024
Write compressed Tables/Matrices	1	73	March 25, 2024
Unable to flatten sample/gene counts for table export	4	405	March 21, 2024
Arrangement of the scores output for hl.pca	4	71	March 18, 2024
How to add new columns in Hail table?	4	579	March 12, 2024
MatrixTable.filter_rows produces error for data on Secure Lustre	6	400	March 11, 2024
Hailctl dataproc submit fails with 'no user project provided'	3	105	March 9, 2024
Using VCF non GT column	14	162	March 4, 2024
When I try to create a Dataproc cluster I get PERMISSION_DENIED	1	77	February 28, 2024
Hail/Apache Spark Not Scaling by Cluster Size	2	99	February 21, 2024
Returning beta estimates for multiple covariates	0	84	February 19, 2024
Running HAIL on more than one compute node	0	80	February 15, 2024
java.lang.NoClassDefFoundError: Could not initialize class is.hail.methods.IBSFFI$	0	93	February 14, 2024
Filter by Position Overlap between two VCFs	3	138	February 8, 2024

I cannot access the VEP, Annotation DB, or Datasets API buckets

Due to changes in the price of transferring data from a Google Cloud Storage multi-regional bucket to a regional bucket, we had to move our VEP reference data, Annotation DB datasets, and Datasets API datasets, into regi…