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Submit script giving ModuleNotFoundError: No module named ‘gnomad’
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4
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29
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July 16, 2024
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How to deploy the latest Hail 0.2 on AWS EMR?
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3
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396
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July 11, 2024
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Illegal reflective access
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0
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32
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July 9, 2024
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Annotating VCF from gnomad VCF and merge join tables in general
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3
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106
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July 9, 2024
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MethodTooLargeException when running vds.combiner
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2
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69
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June 30, 2024
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Duplicated Loci error on VDS Combiner
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3
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71
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June 20, 2024
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Pre-VEPed reference table
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0
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49
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June 18, 2024
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Export_vcf very slow
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0
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66
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June 16, 2024
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Pc_rel memory issue: ConnectionRefusedError: [Errno 111] Connection refused
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10
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511
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June 11, 2024
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LineTooLong Error after union_rows
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0
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75
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June 7, 2024
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Accessing intervals and alleles in matrix table
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3
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113
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June 5, 2024
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Trying to recode output from imputed_sex to 0 or 1
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3
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69
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May 31, 2024
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Isolating Split Variants from VDS
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0
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71
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May 24, 2024
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Shortening MT writing / export_vcf in Variant QC
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0
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92
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May 23, 2024
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Hail fails after installing it on a single computer
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6
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352
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May 23, 2024
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Error in load_dataset()
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6
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183
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May 23, 2024
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ConnectionError after mt.aggregate_cols(hl.agg.collect(…)) and hl.nd.array() in _linear_skat
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1
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186
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May 22, 2024
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VDS combiner unsuccesful on large cohort
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2
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147
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May 22, 2024
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Split huge multi-sample VCF
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1
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427
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May 17, 2024
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Question about Ordering unsorted dataset with network shuffle
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0
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122
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May 16, 2024
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Ploidy error when trying to extract X-chromosome snps
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3
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104
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May 16, 2024
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Most efficient way to filter and densify VDS
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4
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175
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May 14, 2024
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Can I create a notebook that continues to run when I close my laptop?
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1
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417
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November 25, 2020
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Exporting Hail MT to VCF - Missing Genotypes
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11
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183
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May 8, 2024
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Slow speed when using gnomadV3 callset
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0
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107
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May 8, 2024
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VDS, VCF and VQSR
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1
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156
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May 7, 2024
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Hl.vds.new_combiner gives unexpected TypeError
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2
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106
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May 7, 2024
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IllegalArgumentException
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1
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107
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May 6, 2024
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Ld_prune() reference
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1
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90
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May 6, 2024
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No module named 'hail.experimental.vcf_combiner'
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1
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104
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May 2, 2024
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