|
Most efficient way to filter and densify VDS
|
|
4
|
160
|
May 14, 2024
|
|
Can I create a notebook that continues to run when I close my laptop?
|
|
1
|
416
|
November 25, 2020
|
|
Exporting Hail MT to VCF - Missing Genotypes
|
|
11
|
166
|
May 8, 2024
|
|
Slow speed when using gnomadV3 callset
|
|
0
|
102
|
May 8, 2024
|
|
VDS, VCF and VQSR
|
|
1
|
141
|
May 7, 2024
|
|
Hl.vds.new_combiner gives unexpected TypeError
|
|
2
|
103
|
May 7, 2024
|
|
IllegalArgumentException
|
|
1
|
106
|
May 6, 2024
|
|
Ld_prune() reference
|
|
1
|
88
|
May 6, 2024
|
|
No module named 'hail.experimental.vcf_combiner'
|
|
1
|
101
|
May 2, 2024
|
|
Are 0/0 genotypes counted as defined in hl.is_defined(mt.GT)? And are NA genotypes counted as missing in hl.is_missing(mt.GT)?
|
|
1
|
121
|
April 26, 2024
|
|
UK Biobank RAP - Generating Summary File from Variant QC
|
|
3
|
150
|
April 26, 2024
|
|
Aggregating a numeric array
|
|
2
|
230
|
April 11, 2024
|
|
Distributing import_vcf and multi_way_union_mts across Spark workers
|
|
0
|
122
|
April 11, 2024
|
|
Outputting sample IDs for multi allelic sites
|
|
5
|
181
|
April 10, 2024
|
|
Trinucleotide Count
|
|
0
|
107
|
April 1, 2024
|
|
Hail Tutorial Error
|
|
0
|
147
|
March 31, 2024
|
|
Unable to connect to Jupyter notebook
|
|
2
|
226
|
March 27, 2024
|
|
Is there a more computationally efficient way to get a single variant from VDS?
|
|
3
|
166
|
March 27, 2024
|
|
REF ALT miss-matching after split multi-allelic lines
|
|
4
|
159
|
March 27, 2024
|
|
Understanding how hwe_normalized_pca works
|
|
2
|
234
|
March 26, 2024
|
|
NA causes export errors out
|
|
4
|
158
|
March 26, 2024
|
|
Write compressed Tables/Matrices
|
|
1
|
133
|
March 25, 2024
|
|
Unable to flatten sample/gene counts for table export
|
|
4
|
467
|
March 21, 2024
|
|
Arrangement of the scores output for hl.pca
|
|
4
|
122
|
March 18, 2024
|
|
How to add new columns in Hail table?
|
|
4
|
647
|
March 12, 2024
|
|
MatrixTable.filter_rows produces error for data on Secure Lustre
|
|
6
|
471
|
March 11, 2024
|
|
Hailctl dataproc submit fails with 'no user project provided'
|
|
3
|
170
|
March 9, 2024
|
|
Using VCF non GT column
|
|
14
|
222
|
March 4, 2024
|
|
When I try to create a Dataproc cluster I get PERMISSION_DENIED
|
|
1
|
181
|
February 28, 2024
|
|
Hail/Apache Spark Not Scaling by Cluster Size
|
|
2
|
180
|
February 21, 2024
|