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Using HDFS on EMR
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3
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54
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August 23, 2024
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Extracing sample IDs into a Python List
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0
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30
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August 8, 2024
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Hail installation fail at No rule to make target `jni.h' even after setting JAVA_HOME
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0
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22
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August 1, 2024
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How to recode config in a matrix table
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0
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18
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July 29, 2024
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Cannot Get Sequence Information
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0
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35
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July 26, 2024
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Submit script giving ModuleNotFoundError: No module named ‘gnomad’
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4
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46
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July 16, 2024
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How to deploy the latest Hail 0.2 on AWS EMR?
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3
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413
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July 11, 2024
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Illegal reflective access
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0
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60
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July 9, 2024
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Annotating VCF from gnomad VCF and merge join tables in general
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3
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166
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July 9, 2024
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MethodTooLargeException when running vds.combiner
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2
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82
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June 30, 2024
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Duplicated Loci error on VDS Combiner
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3
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81
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June 20, 2024
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Pre-VEPed reference table
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0
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52
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June 18, 2024
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Export_vcf very slow
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0
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83
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June 16, 2024
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Pc_rel memory issue: ConnectionRefusedError: [Errno 111] Connection refused
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10
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743
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June 11, 2024
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LineTooLong Error after union_rows
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0
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96
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June 7, 2024
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Accessing intervals and alleles in matrix table
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3
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150
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June 5, 2024
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Trying to recode output from imputed_sex to 0 or 1
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3
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76
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May 31, 2024
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Isolating Split Variants from VDS
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0
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78
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May 24, 2024
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Shortening MT writing / export_vcf in Variant QC
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0
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120
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May 23, 2024
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Hail fails after installing it on a single computer
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5
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380
|
May 23, 2024
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Error in load_dataset()
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6
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202
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May 23, 2024
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ConnectionError after mt.aggregate_cols(hl.agg.collect(…)) and hl.nd.array() in _linear_skat
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1
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196
|
May 22, 2024
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VDS combiner unsuccesful on large cohort
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2
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177
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May 22, 2024
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Split huge multi-sample VCF
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1
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432
|
May 17, 2024
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Question about Ordering unsorted dataset with network shuffle
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0
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143
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May 16, 2024
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Ploidy error when trying to extract X-chromosome snps
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3
|
142
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May 16, 2024
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Most efficient way to filter and densify VDS
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4
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252
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May 14, 2024
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Can I create a notebook that continues to run when I close my laptop?
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1
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427
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November 25, 2020
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Slow speed when using gnomadV3 callset
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0
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110
|
May 8, 2024
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VDS, VCF and VQSR
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1
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208
|
May 7, 2024
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