|
Duplicated Loci error on VDS Combiner
|
|
3
|
83
|
June 20, 2024
|
|
Pre-VEPed reference table
|
|
0
|
52
|
June 18, 2024
|
|
Export_vcf very slow
|
|
0
|
87
|
June 16, 2024
|
|
Pc_rel memory issue: ConnectionRefusedError: [Errno 111] Connection refused
|
|
10
|
773
|
June 11, 2024
|
|
LineTooLong Error after union_rows
|
|
0
|
97
|
June 7, 2024
|
|
Accessing intervals and alleles in matrix table
|
|
3
|
164
|
June 5, 2024
|
|
Trying to recode output from imputed_sex to 0 or 1
|
|
3
|
76
|
May 31, 2024
|
|
Isolating Split Variants from VDS
|
|
0
|
79
|
May 24, 2024
|
|
Shortening MT writing / export_vcf in Variant QC
|
|
0
|
123
|
May 23, 2024
|
|
Hail fails after installing it on a single computer
|
|
5
|
393
|
May 23, 2024
|
|
Error in load_dataset()
|
|
6
|
208
|
May 23, 2024
|
|
ConnectionError after mt.aggregate_cols(hl.agg.collect(…)) and hl.nd.array() in _linear_skat
|
|
1
|
197
|
May 22, 2024
|
|
VDS combiner unsuccesful on large cohort
|
|
2
|
186
|
May 22, 2024
|
|
Split huge multi-sample VCF
|
|
1
|
433
|
May 17, 2024
|
|
Question about Ordering unsorted dataset with network shuffle
|
|
0
|
146
|
May 16, 2024
|
|
Ploidy error when trying to extract X-chromosome snps
|
|
3
|
158
|
May 16, 2024
|
|
Most efficient way to filter and densify VDS
|
|
4
|
272
|
May 14, 2024
|
|
Can I create a notebook that continues to run when I close my laptop?
|
|
1
|
429
|
November 25, 2020
|
|
Slow speed when using gnomadV3 callset
|
|
0
|
110
|
May 8, 2024
|
|
VDS, VCF and VQSR
|
|
1
|
223
|
May 7, 2024
|
|
Hl.vds.new_combiner gives unexpected TypeError
|
|
2
|
129
|
May 7, 2024
|
|
IllegalArgumentException
|
|
1
|
118
|
May 6, 2024
|
|
Ld_prune() reference
|
|
1
|
91
|
May 6, 2024
|
|
No module named 'hail.experimental.vcf_combiner'
|
|
1
|
112
|
May 2, 2024
|
|
Are 0/0 genotypes counted as defined in hl.is_defined(mt.GT)? And are NA genotypes counted as missing in hl.is_missing(mt.GT)?
|
|
1
|
134
|
April 26, 2024
|
|
UK Biobank RAP - Generating Summary File from Variant QC
|
|
3
|
182
|
April 26, 2024
|
|
Aggregating a numeric array
|
|
2
|
238
|
April 11, 2024
|
|
Distributing import_vcf and multi_way_union_mts across Spark workers
|
|
0
|
127
|
April 11, 2024
|
|
Outputting sample IDs for multi allelic sites
|
|
5
|
201
|
April 10, 2024
|
|
Trinucleotide Count
|
|
0
|
109
|
April 1, 2024
|