I wanted to filter based on a locus; however it is giving me an error. data = mt.filter_rows((mt.locus == 1:139120)),keep=True) I have tried several permutations of the above; the error persists

type errors, probably. try: filter_rows(mt.locus == hl.locus('1', 139120))

Hi, What is the best way to filter for multiple locations? For example python list of 1000 <LocusExpression of type locus<GRCh37>>. How should I pass it to the .mt to filter most efficiently? Thanks.

I created snps_locuses - a list of 1000 <LocusExpression of type locus<GRCh37>> The solution that worked for me: mt = mt.filter_rows(hl.literal(snps_locuses).contains(mt.locus)) Thanks.

How to filter to a specific locus

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How to filter to a specific locus

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