Hi all, hope you guys are well! I had a simple question. I have a set ~900 sample-specific VCFs that I would like to import and combine in Hail. I tried on a small list of two vcfs (if this command is correct) and receiving the below error vcf_list = [“gs://maze-data-external-private/answer-als/…

Importing many sample-specific VCFs

beryl_maze April 7, 2021, 3:00pm 4

I also realize this might be a duplicate of Merge vcfs like bcftools merge - #5 by njbernstein but I couldn’t quite see where in Konrad’s code he was referring to

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