Hi, I am trying to run VariantDatasetCombiner like this: path_to_input_list = ‘input_files.txt’ # a file with one GVCF path per line gvcfs = with hl.hadoop_open(path_to_input_list, ‘r’) as f: for line in f: print(line) gvcfs.append(line.strip()) combiner = hl.vds.new_combiner( output_path…

VariantDatasetCombiner - dataset contains both multiallelic variants and duplicated loci

gameforcela12 January 17, 2023, 8:25pm 2

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