Hi, after I import the bgz vcf file, the above command gives rise to the following error: FatalError: HailException: variant 10:32557367:CTTTTTTT:C,CT,CTT,CTTT,CTTTT: INFO field InbreedingCoeff: unable to convert -nan (of class java.lang.String) to Double: caught java.lang.NumberFormatException: …

Vds.summarize().report() error in hail 0.1

trptyrphe July 11, 2018, 2:46pm 7

You mean import_vcf step? how?

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