Hey,
I’m trying to run a logistic regression on my matrix table:
gwas = hl.logistic_regression_rows(test='wald',
y=hl.int(mt_filtered.pheno["Sel Related Thrombocytopenia"]),
x=mt_filtered.GT.n_alt_alleles(),
covariates=cov)
p = hl.plot.manhattan(gwas.p_value)
show(p)
but, I keep getting this error:
Hail version: 0.2.82-2ab242915c2c
Error summary: HailException: expected 294 fields, but found 295 fields
I passed quote=’"’ to the import_table, but still with no change.
please help me
thanks!
Shiri