I had a question regarding using HAIL after utilizing variant calling for WGS datasets.
I have millions of variations called by GATK best practices of WGS datasets. We obtained the summary stats for the same in a chromosome wise manner using HAIL. Next, we wanted to check the novel and common variations against gnomAD-v3 by gnomAD utils in HAIL.
Could you please tell me whether can we do not this check in our local cluster and not use cloud services using Hail utilities for gnomAD.
Thanks in advance