Identify independent signals in a gwas locus


Is there a way to identify independent associations, using LD, in a given locus? Similar to the plink --clump function or GCTA-cojo?

I could just export the GWAS results to a table and use these tools, but I was wondering if there was a way to do a similar thing in Hail.


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Hail does not currently support this functionality. I recommend exporting and using plink.