Import other python module on hail

Hail Query & hailctl
1

Hello.

I have one question to use Hail,

Is it possible to import other python module on hail?

I try to analysis PRS on hail (I know clumping analysis on hail)

Source code of PRScs, which is PRS analysis tool, python module, is opened.

So, anybody knows how to other python analysis module(like PRScs…) import and use on hail

Thank you!~

2

Can you be a little more specific about what you want to do? It’s possible to pull Hail data down to Pandas dataframes or Numpy arrays, but it’s not possible to run arbitrary python code inside of a MatrixTable.annotate_rows (or similar) method.