Inbreeding coefficient function in Hail

Hail Query & hailctl
1

Hi all! I am just wondering if any of you know if there is an in-built function in Hail to calculate inbreeding coefficient from a MatrixTable.

Thanks!

2

Hi @CuriousGeneticist,

We have an aggregator which computes inbreeding coefficients. See the docs here, which also has an example of using it to annotate a MatrixTable with the per-sample inbreeding coefficients.

Does that look like what you need?