Hi All, I am struggling with getting the intersect of of variants between two genotype dataset that I have converted to matrix table.
I tried following tutorial and cheatsheet. Unfortunately I keep getting error after error.
Is there anything that is equivalent just doing
intersect_variants=set(variant_genotype1) & set(variant_genotype2) `
then running an indexing function on one of the matrix table? Like if it was pandas, it would be genotype.loc[intersect_variants]