'locus' (type 'locus<any>')

ValueError: Method ‘variant_qc’ requires row key to be two fields ‘locus’ (type ‘locus’) and ‘alleles’ (type ‘array’)
‘locus’: struct{contig: str, position: int32}
‘alleles’: array

1 Like

Thanks for the report! This PR will relax this requirement. Expect the next release of Hail to support this operation on your dataset. [query] relax requirements of variant_qc by danking · Pull Request #12851 · hail-is/hail · GitHub