I tried to use this to parse the CSQ column using
split_csq.map(lambda x: x.split('\|')).
However, the returned didn’t split by ‘|’
split_csq = mt.info.CSQ
split_transcripts = split_csq.map(lambda x: x.split('|'))
split_transcripts = split_csq.map(lambda x: x.split('|'))
n
split_transcripts.show()
locus
alleles
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