Nirvana exception without any relevant error

Hail Query & hailctl
1

Hi, I tried to run Nirvana (last version 3.17.0) on the matrixtable and I got HailException: nirvana command failed with non-zero exit status 1 (hail log is attached) . There is no interesting error message and It just seems that the spark has a problem running the nirvana dotnet command.

I run hail locally in docker image (dockerfile attached), where the Nirvana was installed subsequently.
When I used hail generated Nirvana command (from log) on my vcf it works well. Did I miss something?

Thank you Radim

Dockerfile.txt (521 Bytes)
hail.log (465.9 KB)

2

I found using Nirvana workaround here .
Thank you @thondeboer for your solution.

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