Hi all, I am trying to load a VCF file into a MatrixTable and I am getting the error:
Hail version: 0.2.81-edeb70bc789c
Error summary: VCFParseError: invalid character 'c' in integer literal
Is there a way around this issue by removing the “c”? Thank you.
Is this a really big VCF file? The easiest solution would hopefully be to just fix the file to not have a c where it doesn’t belong.
Is there more info in the stack trace? It would be nice if it gave you a hint as to where the error is in the file.
That makes sense! I have fixed the VCF file and all is good