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ConnectionError after mt.aggregate_cols(hl.agg.collect(…)) and hl.nd.array() in _linear_skat
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1
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233
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May 22, 2024
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VDS combiner unsuccesful on large cohort
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2
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261
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May 22, 2024
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Split huge multi-sample VCF
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1
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476
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May 17, 2024
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Question about Ordering unsorted dataset with network shuffle
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0
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171
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May 16, 2024
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Ploidy error when trying to extract X-chromosome snps
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3
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238
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May 16, 2024
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Most efficient way to filter and densify VDS
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4
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468
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May 14, 2024
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Can I create a notebook that continues to run when I close my laptop?
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1
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480
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November 25, 2020
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Slow speed when using gnomadV3 callset
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0
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145
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May 8, 2024
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VDS, VCF and VQSR
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1
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298
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May 7, 2024
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Hl.vds.new_combiner gives unexpected TypeError
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2
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177
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May 7, 2024
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IllegalArgumentException
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1
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162
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May 6, 2024
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Ld_prune() reference
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1
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112
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May 6, 2024
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No module named 'hail.experimental.vcf_combiner'
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1
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149
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May 2, 2024
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Are 0/0 genotypes counted as defined in hl.is_defined(mt.GT)? And are NA genotypes counted as missing in hl.is_missing(mt.GT)?
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1
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172
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April 26, 2024
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UK Biobank RAP - Generating Summary File from Variant QC
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3
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238
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April 26, 2024
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Aggregating a numeric array
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2
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278
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April 11, 2024
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Distributing import_vcf and multi_way_union_mts across Spark workers
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0
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145
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April 11, 2024
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Outputting sample IDs for multi allelic sites
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5
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269
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April 10, 2024
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Trinucleotide Count
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0
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118
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April 1, 2024
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Hail Tutorial Error
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0
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186
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March 31, 2024
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Unable to write matrix tables to MinIO S3 storage
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1
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247
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March 29, 2024
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Unable to connect to Jupyter notebook
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2
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289
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March 27, 2024
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Is there a more computationally efficient way to get a single variant from VDS?
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3
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290
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March 27, 2024
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REF ALT miss-matching after split multi-allelic lines
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4
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273
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March 27, 2024
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Understanding how hwe_normalized_pca works
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2
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594
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March 26, 2024
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NA causes export errors out
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4
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236
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March 26, 2024
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Write compressed Tables/Matrices
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1
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173
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March 25, 2024
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Best practices for setting up GCP billing for Hail for the first time
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1
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250
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March 21, 2024
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Unable to flatten sample/gene counts for table export
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4
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539
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March 21, 2024
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Arrangement of the scores output for hl.pca
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4
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190
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March 18, 2024
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